[2026-05-24] wiki index rebuild, autonomous-agent-safety synthesis

wiki/index.md

@@ -1,13 +1,13 @@
 ---
 title: Wiki Index
-updated: '2026-05-23'
+updated: '2026-05-24'
 ---
 
 # Wiki Index
 
 > Content catalog. Every wiki page listed with a one-line summary.
 > Read this first to find relevant pages for any query.
-> Last updated: 2026-05-23 | Total pages: 28
+> Last updated: 2026-05-24 | Total pages: 43
 
 ## Personal OS — Core
 
@@ -17,6 +17,8 @@ updated: '2026-05-23'
 - [[personal-os-self-modification]] — How Eagle and Alex can safely evolve the system
 - [[personal-os-sync-pipeline]] — sync.js + generate-status.js: how Asana data flows into status.md
 - [[personal-os-schema]] — PostgreSQL schema: tasks, stories, task_edges, wiki_pages, memory_store
+- [[personal-os-state-2026-04-27]] — State snapshot post-catchup execution (Apr 2026); supersedes v3 plan docs
+- [[personal-os-catchup-plan-2026-04-27]] — Executor build-order handoff doc; companion to state snapshot
 
 ## Work / DDG
 
@@ -47,16 +49,39 @@ updated: '2026-05-23'
 - [[tech/htpc-kodi-layout]] — Kodi layout, WoL MAC, NFS sources
 - [[tech/reflect-skip-fuse]] — New SwiftUI View requires manual Kotlin stub in 2 places
 - [[tech/arr-stack-taiga]] — Taiga arr stack (2026-05-20), config, router.py location
+- [[tech/hermes-eagle-mac]] — Hermes on Eagle Mac M4; claude-proxy, Zulip setup, known pitfalls
+- [[tech/jellyfin-transcode-rpi5]] — Jellyfin RPi5 transcoding pitfalls; PGS/subtitle handling
+- [[tech/vault-git-sync]] — Vault git sync via Taiga bare repo; setup, pull hooks, pitfalls
 
-## Personal Projects
+## Entities
 
-- (none yet — Reflect app to be added)
+- [[user-profile]] — Alex's profile; roles, working style, preferences
+- [[entities/library-app]] — Personal book library web UI on TrueNAS; replacement for inpxer (May 2026)
 
-## Concepts
+## Comparisons
+
+- [[comparisons/hermes-native-vs-docker]] — Hermes on Eagle (native) vs Kraken (Docker); deployment trade-offs
+
+## Concepts — AI & Agents
+
+- [[concepts/autonomous-agent-safety]] — Design patterns for safe autonomous agents; distilled from security incident
+- [[concepts/executor-orchestrator]] — Eagle-as-orchestrator spawning Executor worker; auto-approve protocol table
+- [[concepts/executor-security-incident]] — Post-mortem: autonomous Asana boundary crossing (May 2026); root causes
+- [[concepts/agent-memory-architecture]] — LLM agent memory taxonomy (arXiv 2603.07670) applied to personal-os
+- [[concepts/knowledge-lifecycle]] — How knowledge flows from session to permanent wiki memory
+
+## Concepts — Vault & Wiki
 
 - [[concepts/vault-agent-integration]] — How Eagle, wiki-ingest, and obsidian-mcp work as a unified vault layer
+- [[concepts/vault-strategy]] — Three vault tasks that must not be mixed (enrichment, storage, agent-context)
+
+## Concepts — Media & Home
+
+- [[concepts/kraken-media-stack]] — Full Kraken media server stack; Jellyfin, Arr, Transmission overview
+- [[concepts/watchlist-automation]] — Full watchlist automation flow; Radarr/Sonarr triggers to Jellyfin
 
 ## Meta
 
+- [[research-queue]] — Wiki gap tracker; topics to research and crystallize
 - [[SCHEMA]] — Domain rules, tag taxonomy, frontmatter conventions
-- [[vault-filling-guide]] — Listed above; also describes vault structure
+- [[log]] — Chronological action log